Source: https://digitalresearchtools.pbworks.com/w/page/17801648/Citation%20Management%20Tools

Citation Management Tools

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Definition:

Citation management tools enable researchers to capture bibliographic
information about research materials, create bibliographies, add
footnotes, and manage research collections.  Some citation management
tools also make it easy to share references with other researchers.

Tools:

• BibDesk: "BibDesk is a graphical bibliography manager for OS X, providing powerful BibTeX file management for Mac users." (Free, Mac)
• BibMe:  online bibliography-maker generating MLA, APA, Chicago and Turabian citations (Free, web-based)
• Bibus:
  open source "bibliographic and reference management software" that is
  designed for collaboration, hierarchical organization of resources, and
  live query of medical databases, such as PubMed (Free, cross-platform)
• Bookends: reference manager
  with support for retrieving bibliographic information and related files
  from the Web, automatically generating bibliographies, etc. (Commerical,
  Mac)
• Citeline: "a service to facilitate the web publishing of bibliographies and citation collections as interactive exhibits
  and facilitate the sharing of this type of data."  Can import Zotero
  and BibTex files. Part of MIT's Simile project. (Free, web-based)
• CiteULike: "A free service
  for managing and discovering scholarly references...[used] to organise
  your academic papers." (Free, web-based)
• Connotea [Review]: "Free online reference management for all researchers, clinicians and scientists" (Free, web-based)
• EndNote: "Web-based tool for
  managing and citing references in papers and creating
  bibliographies...integrates the following tasks into one program: Search
  bibliographic databases on the Internet; organize references, images,
  PDFs and other files; construct your paper with built-in manuscript
  templates; watch the bibliography and figure list appear as you
  write" (Commercial, web-based)
• Heurist: a collaborative
  academic bookmarking, bibliographic, and general database with rich data
  types, annotation, record interlinking and publication capabilities,
  including bibliography output and citation within Word. Reference import
  and bookmarklet. (Free, web-based; open source planned 2009)
• JabRef: "bibliography reference manager" that generates BibTeX files (Open source, cross-platform)
• Mendeley: "Free social
  software for managing and sharing research papers. It is also a Web 2.0
  site for discovering research trends and connecting to like-minded
  academics." (Free, Windows/Mac/Linux)
• MyPeers: "follow your peers and get notified when they publish new works"; access publications; measure impact (Free, Mac)
• NoodleTools: MLA, APA,
  Chicago, and Turabian integrated citing and note-taking teaching
  software which prompts for analysis of source types and is unique in
  offering personal help on any citation.  Instructor/librarian view
  allows teacher to comment on work-in-progress providing just-in-time
  feedback in-context (Free and Subscription, web-based)
• OttoBib: allows you to enter an ISBN number and receive a formatted citation (Free, web-based)
• OWL at Purdue:
  a reference site, maintained by Purdue, which provides the user with
  many of the style guidelines listed in the handbook of the Modern
  Language association (Free, web-based) 
• Papers: "Papers bundles
  all the great technologies that come with Mac OS X to give you a
  completely new workflow for reading scientific articles. You seek,
  download, archive, and organize all your articles within a single
  application. But that is just the start, using spotlight you instantly
  find the paper you are looking for. Read it fullscreen, add your notes,
  send a copy to a colleague..." (Commercial, Mac OS X)
• Qiqqa: Manage, annotate and tag PDFs; sync collections (Free, PC)
• Referencer: "a Gnome application to organise documents or references, and ultimately generate a BibTeX bibliography file" (Open source, Linux)
• RefWorks [Review]:
  "RefWorks -- an online research management, writing and collaboration
  tool -- is designed to help researchers easily gather, manage, store and
  share all types of information, as well as generate citations and
  bibliographies." (Commercial, web-based)
• Sente:
  "Sente 5 is the next-generation academic reference manager. Sente helps
  you find, organize, review and cite the academic literature in your
  field, and it does it in ways that you have probably not thought
  possible before. Sente also helps you build and maintain your library of
  PDF files for these references....Sente also excels at properly
  formatting bibliographies in your papers" (Commercial, Mac)
• Zotero [Review]: "web-based  extension to help you collect, manage, and cite your research sources", compiles a library that can be accessed remotely (Free; Windows/Mac/Linux, requires Firefox browser)

Resources:

• Comparison of Reference Management Software:
  Wikipedia article with summary information twenty different citation
  management tools, including cost, license, import/export formats,
  citation and reference list formats, word processor integration, and
  ability to connect to external databases.

digitalresearchtools / Citation Management Tools